SPSmart

A set of Perl scripts for combining single nucleotide polymorphism (SNP) data from within and between databases.

Topic

Biology, Genetics, DNA polymorphism

Details

Operation: Query and retrieval
Software interface: Command-line interface
Language: Perl
Operating system: Linux, Microsoft Windows, Mac OS X
License: Public domain

Cost

Version name: -

Credit: Amigo J, Salas A, Phillips C, Carracedo A.
Contact: Jorge Amigo Lechuga jorge.amigo at usc.es
Collection: -

Publications

Amigo J, Salas A, Phillips C, Carracedo A "SPSmart: adapting population based SNP genotype databases for fast and comprehensive web access." BMC Bioinformatics 2008 https://doi.org/10.1186/1471-2105-9-428
PMID: 18847484
PMCID: PMC2576268

Download and documentation

Source: http://spsmart.cesga.es/software.php
Home page: http://spsmart.cesga.es/

If you find errors, please report here.

SECTIONS

Tutorials
In-house software
Blog
News
Find Jobs
History
Definition of Bioinformatics
ENCYCLOPEDIA
COVID-19
⚬ Timeline of outbreak
⚬ Blog
⚬ Scientific Facts
⚬ Daily statistics
⚬ News

TOOLS

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched

Database of Bioinformatics Software Tools and Resources.

Ads

SPSmart

SPSmart

Topic

Details

Publications

Download and documentation

TOOLS

1. SNP Tools

2. GWAS Tools

3. Genotype Imputation Tools

4. MSA tools

5. CNV tools

6. WGA tools

7. RNA-seq tools

8. Proteomics Tools

9. Nucleic Acid Structure Analysis Tools

10. Nucleic Acid Sequence Analysis Tools

11. Sequence Logo Tools

12. In-house Software Tools