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SWEEP

Pipeline for filtering allelic SNPs from homeologous SNPs (false positives) in allopolyplod species.

Topic

Population genetics, Computational biology, Genetic variation

Details

Operation: Genetic variation analysis
Software interface: Command-line interface
Language: Perl
Operating system:
License: The MIT licence

Cost

Version name: -

Credit: Clevenger JP, Ozias-Akins P.
Contact: -
Collection: -

Publications

Clevenger JP, Ozias-Akins P "SWEEP: A Tool for Filtering High-Quality SNPs in Polyploid Crops." G3 (Bethesda) 2015; 5(9):1797-803 https://doi.org/10.1534/g3.115.019703
PMID: 26153076
PMCID: PMC4555216

Download and documentation

Source: https://github.com/jclev-uga/SWEEP/
Home page: -:

If you find errors, please report here.

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