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VarDetect

VarDetect

A tool to detect single nucleotide polymorphism in fluorescence chromatograms.

Topic

Genetics, Genetic variation, DNA, Sequence analysis

Details

  • Operation: Genetic variation analysis, SNP detection
  • Software interface: Desktop graphical user interface, command-line interface
  • Language: Java
  • Operating system: Linux, Microsoft Windows, Mac OS X
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: Ngamphiw C, Kulawonganunchai S, Assawamakin A, Jenwitheesuk E, Tongsima S.
  • Contact: sissades at biotec.or.th
  • Collection: -

Publications

Ngamphiw C, Kulawonganunchai S, Assawamakin A, Jenwitheesuk E, Tongsima S "VarDetect: a nucleotide sequence variation exploratory tool." BMC Bioinformatics 2008 https://doi.org/10.1186/1471-2105-9-S12-S9
PMID: 19091032
PMCID: PMC2638149


Download and documentation




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