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gmRAD

gmRAD

a tool for calling SNP genotypes across a hybrid population with RAD-seq data for genetic linkage mapping.

Topic

Biology, Genetics, DNA polymorphism

Details

  • Operation: SNP calling
  • Software interface: Command-line interface
  • Language: Perl
  • Operating system: Linux, Mac OS X, Microsoft Windows
  • License: GNU GPL v3
  • Cost: -
  • Version name: 1.2
  • Credit: Yao D, Wu H, Chen Y, Yang W, Gao H, Tong C.
  • Contact: Chunfa Tong tongchf at njfu.edu.cn
  • Collection: -

Publications

Yao D, Wu H, Chen Y, Yang W, Gao H, Tong C. "gmRAD: an integrated SNP calling pipeline for genetic mapping with RADseq across a hybrid population." Brief. Bioinformatics 2018 Nov;():. https://doi.org/10.1093/bib/bby114
PMID: 30445432


- "Corrigendum To: gmRAD: An Integrated SNP Calling Pipeline for Genetic Mapping With RADseq Across a Hybrid Population" Brief Bioinform 2019 Jan 14 https://doi.org/10.1093/bib/bbz002
PMID: 30649178


Download and documentation




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