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A management of single nucleotide polymorphisms (SNPs). It creates a local SQLite database and schema and outputs requested objects. The output contains detailed information about each SNP that can be filtered in various ways.


Biology, Genetic vairiation, DNA polymorphism


  • Operation: Query and retrieval
  • Software interface: Command-line interface
  • Language: Ruby
  • Operating system: Linux
  • License: The MIT License
  • Cost: Free
  • Version name: 2.12.0
  • Maturity:
  • Credit: Al-Shahib A, Underwood A.
  • Contact: at, anthony.underwood at
  • Collection: -


Al-Shahib A, Underwood A "snp-search: simple processing, manipulation and searching of SNPs from high-throughput sequencing." BMC Bioinformatics 2013
PMID: 24246037
PMCID: PMC3840589

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