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snpTree

snpTree

Single nucleotide polymorphism detection and construction of a phylogenetic tree.

Topic

Phylogenetics, DNA polymorphism

Details

  • Operation: Sequence, Phylogenetic tree generation, Phylogenetic tree
  • Software interface: Web user interface
  • Language: -
  • Operating system: Linux, Mac OS X, Microsoft Windows
  • License: Other
  • Cost: Free
  • Version name: 1.1
  • Maturity: Emerging
  • Credit: Leekitcharoenphon P, Kaas RS, Thomsen MC, Friis C, Rasmussen S, Aarestrup FM.
  • Contact: http://www.bioinformatics.dtu.dk/english/Service/Contact
  • Collection: -

Publications

Leekitcharoenphon P, Kaas RS, Thomsen MC, Friis C, Rasmussen S, Aarestrup FM "snpTree--a web-server to identify and construct SNP trees from whole genome sequence data." BMC Genomics 2012 https://doi.org/10.1186/1471-2164-13-S7-S6
PMID: 23281601
PMCID: PMC3521233


Download and documentation




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