For better experience, turn on JavaScript!



GWAtoolbox is a tool for quality control and handling of data files originating from genome-wide association studies (GWAS).


Genetics; Studies


  • Operation: Data handling; Analysis; Quality control
  • Software interface: Command-line user interface
  • Language: R
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: GNU General Public License v>=3
  • Cost: Free
  • Version name: -
  • Maturity: Stable
  • Credit: -
  • Contact: Daniel Taliun daniel.taliu​n _at_
  • Collection: -


Fuchsberger C, Taliun D, Pramstaller PP, Pattaro C; CKDGen consortium "GWAtoolbox: An R Package for Fast Quality Control and Handling of Genome-Wide Association Studies Meta-Analysis Data" Bioinformatics. 2012 Feb 1;28(3):444-5.
PMID: 22155946

Download and documentation

If you find errors, please report here.