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OrdinalGWAS
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OrdinalGWAS

OrdinalGWAS is a tool for genome-wide association studies (GWAS) for ordered categorical phenotypes.



OrdinalGWAS

OrdinalGWAS is a tool for genome-wide association studies (GWAS) for ordered categorical phenotypes.

Topic

GWAS study; Biobank; Genotype and phenotype; Exome sequencing

Details

  • Operation: Collapsing methods; Imputation; Regression analysis
  • Software interface: Command-line user interface
  • Language: Julia
  • Operating system: Linux
  • License: Not stated
    • Cost: Free
  • Version name: -
  • Credit: the Burroughs WellcomeFund Inter‐school Training Program in Chronic Diseases(CAG), the National Institute of GeneralMedical Sciences, the National Human Genome Research Institute, the National ScienceFoundation, the National Institute of Diabetes and Digestive and Kidney Diseases, National Heart, Lung, and Blood Institutes.
  • Contact: Jin J. Zhou jzhou _at_ email.arizona.edu
  • Collection: -

Publications

German CA, Sinsheimer JS, Klimentidis YC, Zhou H, Zhou JJ "Ordered multinomial regression for genetic association analysis of ordinal phenotypes at Biobank scale" Genetic Epidemiology. 2019; 1-13. https://doi.org/10.1002/gepi.22276


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