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Variant Ranker

Variant Ranker

Variant Ranker is a web-based tool to rank and annotate variants in genome-scale. Variant Ranker includes several modules: 1. Variant Ranker: Single sample VCF/List of Variants, 2. Filtering: Multi-sample VCF/Case-Control Filtering, 3. Filtering: Result Explorer, 4. Network Analyser, and 5. SNPtoGene.


Genomics; Sequence analysis; Genetic variation; GWAS study


  • Operation: Genetic variation analysis
  • Software interface: Web user user interface
  • Language: R;PHP;Javascript
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Maturity: Stable
  • Credit: FP7- People-2012-ITN, project: TS-EUROTRAIN, FP7 project EMTICS.
  • Contact: jalexand _at_
  • Collection: -


Alexander J, Mantzaris D, Georgitsi M, Drineas P, Paschou P "Variant Ranker: a web-tool to rank genomic data according to functional significance." BMC Bioinformatics. 2017 Jul 17;18(1):341.
PMID: 28716001
PMCID: PMC5514526

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