BLUP

A tool for genotype imputation. The BLUP algorithm aims to solve the problem of case-control association with missing data. It assumes the samples to contain related individuals.

Topic

Population genetics

Details

Operation: Imputation
Software interface: Command-line user interface:Library
Language: R
Operating system: Microsoft Windows, Mac OS X, Linux
License: GNU General Public License v3

Cost

Version name: 1.3.1

Maturity:

Credit: The National Institutes of Health.
Contact: Mary Sara McPeek mcpeek _at_ galton.uchicago.edu
Collection: -

Publications

McPeek MS "BLUP genotype imputation for case-control association testing with related individuals and missing data." J Comput Biol. 2012 Jun;19(6):756-65. https://doi.org/10.1089/cmb.2012.0024
PMID: 22697245
PMCID: PMC3375641

Download and documentation

Source: https://cran.r-project.org/web/packages/
onlinePCA/index.html
Documentation: https://cran.r-project.org/web/packages/
onlinePCA/onlinePCA.pdf
Home page: https://cran.r-project.org/package=onlin
ePCA

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BLUP

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Download and documentation

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