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Mendel Impute

Mendel Impute

A tool for genotype imputation. The MENDEL-IMPUTE algorithm uses matrix completion and a sliding window approach over a single nucleotide polymorphism (SNP). The download package contains documentation.

Topic

Population genetics

Details

  • Operation: Imputation
  • Software interface: Command-line user interface
  • Language: Matlab
  • Operating system: Linux
  • License: Other
  • Cost: Free
  • Version name: v2012
  • Maturity: Stable
  • Credit: United States Public Health Service, North Carolina State University, UC MEXUS-CONACYT doctoral fellowship.
  • Contact: Eric C. Chi ecchi _at_ ucla.edu
  • Collection: -

Publications

Chi EC, Zhou H, Chen GK, Del Vecchyo DO, Lange K "Genotype imputation via matrix completion." Genome Res. 2013 Mar;23(3):509-18. https://doi.org/10.1101/gr.145821.112
PMID: 23233546
PMCID: PMC3589539

Download and documentation


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