tagIMPUTE

tagIMPUTE is a tool to impute untyped single-nucleotide polymorphism (SNPs). The tagIMPUTE algorithm uses flanking SNPs that can predict the SNP for imputation.

Topic

Population genetics; DNA polymorphism

Details

Operation: Imputation
Software interface: Command-line user interface
Language: C
Operating system: Linux
License: Not stated

Cost

Version name: 1.0

Maturity:

Credit: National Institutes of Health (NIH), Gillings Innovation Laboratory (GIL) award at the UNC Gillings School of Global Public Health.
Contact: DY Lin lin _at_ bios.unc.edu
Collection: -

Publications

Hu YJ, Lin DY "Analysis of untyped SNPs: maximum likelihood and imputation methods." Genet Epidemiol. 2010 Dec;34(8):803-15. https://doi.org/10.1002/gepi.20527
PMID: 21104886
PMCID: PMC3030127

Download and documentation

Source: http://dlin.web.unc.edu/files/2013/01/ta
gIMPUTE-1.0-linux.zip
Documentation: http://dlin.web.unc.edu/software/tagimpu
te-2/
Home page: http://dlin.web.unc.edu/software/tagimpu
te-2/
Links: http://dlin.web.unc.edu/files/2013/01/ta
gIMPUTE-1.0-example.zip

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tagIMPUTE

tagIMPUTE

Topic

Details

Publications

Download and documentation

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