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tagIMPUTE

tagIMPUTE

tagIMPUTE is a tool to impute untyped single-nucleotide polymorphism (SNPs). The tagIMPUTE algorithm uses flanking SNPs that can predict the SNP for imputation.

Topic

Population genetics; DNA polymorphism

Details

  • Operation: Imputation
  • Software interface: Command-line user interface
  • Language: C
  • Operating system: Linux
  • License: Not stated
  • Cost: Free
  • Version name: 1.0
  • Maturity: Stable
  • Credit: National Institutes of Health (NIH), Gillings Innovation Laboratory (GIL) award at the UNC Gillings School of Global Public Health.
  • Contact: DY Lin lin _at_ bios.unc.edu
  • Collection: -

Publications

Hu YJ, Lin DY "Analysis of untyped SNPs: maximum likelihood and imputation methods." Genet Epidemiol. 2010 Dec;34(8):803-15. https://doi.org/10.1002/gepi.20527
PMID: 21104886
PMCID: PMC3030127

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