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EMBL-Align is a publicly available database of multiple sequence alignments (MSAs). An associated tool, Webin-Align is a tool for submission of alignments. the EBI SRS (Sequence Retrieval System) server is used to query all the multiple sequence alignments.


Phylogeny; Sequence analysis; Nucleic acid sites, features and motifs; Nucleic acid structure analysis; Sequence sites, features and motifs


  • Operation: Multiple sequence alignment
  • Software interface: Web user interface
  • Language: -
  • License: Not stated
  • Cost: Free
  • Version name:
  • Maturity: Mature
  • Credit: -
  • Contact:
  • Collection: -


Lombard V, Camon EB, Parkinson HE, Hingamp P, Stoesser G, Redaschi N "EMBL-Align: a new public nucleotide and amino acid multiple sequence alignment database." Bioinformatics. 2002 May;18(5):763-4.
PMID: 12050074

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