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Kalignvu is a viewer for multiple sequence alignments and phylogenetic trees.


Sequence analysis; Sequence sites, features and motifs; Bioinformatics; Phylogenetics; Sequencing


  • Operation: Visualisation
  • Input: msf, clustal, fasta, macsim, Newick
  • Output: SVG
  • Software interface: Command-line user interface; web user interface
  • Language: C
  • Operating system: Linux
  • License: GNU GPL v2+
  • Cost: Free
  • Version name: 2.1
  • Maturity: Mature
  • Credit: Swedish Graduate School for Functional Genomics and Bioinformatics.
  • Contact: oliver.frings _at_
  • Collection: -


Lassmann T, Erik LL Sonnhammer "Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignment." Nucleic Acids Research, 34:W596-W599
PMID: 16845078
PMCID: PMC1538774

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