Kalignvu

Kalignvu is a viewer for multiple sequence alignments and phylogenetic trees.

Topic

Sequence analysis; Sequence sites, features and motifs; Bioinformatics; Phylogenetics; Sequencing

Details

Operation: Visualisation
Input: msf, clustal, fasta, macsim, Newick
Output: SVG
Software interface: Command-line user interface; web user interface
Language: C
Operating system: Linux
License: GNU GPL v2+

Cost

Version name: 2.1

Maturity:

Credit: Swedish Graduate School for Functional Genomics and Bioinformatics.
Contact: oliver.frings _at_ sbc.su.se
Collection: -

Publications

Lassmann T, Erik LL Sonnhammer "Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignment." Nucleic Acids Research, 34:W596-W599 https://doi.org/10.1093/nar/gkl191
PMID: 16845078
PMCID: PMC1538774

Download and documentation

Source: http://msa.sbc.su.se/downloads/kalignvu_
2.1.tgz
Documentation: http://msa.sbc.su.se/cgi-bin/msa.cgi
Home page: http://msa.sbc.su.se/cgi-bin/msa.cgi
Links: http://msa.sbc.su.se/cgi-bin/msa.cgi

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Kalignvu

Kalignvu

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Download and documentation

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