A parallelized version of MAFFT multiple sequence alignment (MSA) tool. The parallelization is based on the POSIX Threads library with two approaches: best-first and simple hill-climbing in the alignment refinement stage.
Phylogeny; Sequence analysis; Nucleic acid sites, features and motifs; Nucleic acid structure analysis; Sequence sites, features and motifs
Katoh K, Toh H "Parallelization of the MAFFT multiple sequence alignment program." Bioinformatics. 2010 Aug 1;26(15):1899-900. https://doi.org/10.1093/bioinformatics/btq224
PMID: 20427515
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