A web-based tool, Malakite (Multiple Alignment Automatic Kinship Tiling Engine), is for analysis of aligned blocks in multiple protein sequence alignments.
Proteins; Protein sites, features and motifs
Burkov B, Nagaev B, Spirin S, Alexeevski A "Malakite: an automatic tool for characterisation of structure of reliable blocks in multiple alignments of protein sequences." J Bioinform Comput Biol. 2010 Jun;8(3):503-17.
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