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Mumsa is a tool for the assessment of the quality of multiple sequence alignments (MSAs).


Sequence analysis


  • Operation: Multiple sequence alignment; Validation
  • Input: FASTA
  • Output: -
  • Software interface: Command-line user interface
  • Language: C
  • Operating system: Linux
  • License: GNU GPL v2+
  • Cost: Free
  • Version name: 1.0
  • Maturity: Stable
  • Credit: Swedish Graduate School for Functional Genomics and Bioinformatics.
  • Contact: oliver.frings _at_
  • Collection: -


Lassmann T, Erik LL Sonnhammer "Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignment." Nucleic Acids Research, 34:W596-W599
PMID: 16845078
PMCID: PMC1538774

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