Stacatto is a multiple sequence alignment (MSA) tool that combines the use of three-dimensional structure alignment probabilities and standard amino acid substitution probabilities. Available from the Authors.
Nucleic acid structure analysis; Sequencing; Sequence analysis
Shatsky M, Nussinov R, Wolfson HJ "Optimization of multiple-sequence alignment based on multiple-structure alignment." Proteins. 2006 Jan 1;62(1):209-17. https://doi.org/10.1002/prot.20665
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