CapR is a tool for the analysis of RNA secondary structures by computing the probabilities of each RNA base position location within the structural categories of the stem part, hairpin loop, bulge loop, internal loop, multibranch loop, and exterior loop.
Sequence analysis; RNA; Nucleic acid structure analysis
Fukunaga T, Ozaki H, Terai G, Asai K, Iwasaki W, Kiryu H "CapR: revealing structural specificities of RNA-binding protein target recognition using CLIP-seq data." Genome Biol. 2014; 15(1):R16 https://doi.org/10.1186/gb-2014-15-1-r16
PMID: 24447569
PMCID: PMC4053987
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads