For better experience, turn on JavaScript!


CrossTalkDB

CrossTalkDB

CrossTalkDB is a web-based database for mass spectrometry (MS) data of multiply modified proteins. Users can store, analyze, and compare histone modifications discovered by MS.

Topic

Proteomics; Proteomics experiment; Protein interactions; Protein modifications

Details

  • Operation: Expression data visualisation; Multiple sample visualisation; Visualisation; Expression analysis; Statistical calculation
  • Software interface: Web user interface; Database
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: 5.0
  • Credit: The Danish Council for Independent Research, Natural Sciences (FNU), the Danish National Research Foundation Center for Epigenetics.
  • Contact: veits _at_ bmb.sdu.dk
  • Collection: -

Publications

Schwämmle V, Aspalter CM, Sidoli S, Jensen ON "Large scale analysis of co-existing post-translational modifications in histone tails reveals global fine structure of cross-talk." Mol. Cell Proteomics 2014; 13(7):1855-65 https://doi.org/10.1074/mcp.O113.036335
PMID: 24741113
PMCID: PMC4083120


Schwämmle V, Sidoli S, Ruminowicz C, Wu X, Lee CF, Helin K, Jensen ON "Systems Level Analysis of Histone H3 Post-translational Modifications (PTMs) Reveals Features of PTM Crosstalk in Chromatin Regulation." Mol Cell Proteomics, 2016 https://doi.org/10.1074/mcp.M115.054460
PMID: 27302890
PMCID: PMC4974346


Download and documentation








If you find errors, please report here.