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HDX WorkBench
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HDX WorkBench

HDX WorkBench is a tool for the analysis of Hydrogen/deuterium exchange mass spectrometry (HDX-MS) data from Waters or Thermo instruments. The HDX WorkBench has functions for calculating the deuteration levels of peptides and visualization tools.



HDX WorkBench

HDX WorkBench is a tool for the analysis of Hydrogen/deuterium exchange mass spectrometry (HDX-MS) data from Waters or Thermo instruments. The HDX WorkBench has functions for calculating the deuteration levels of peptides and visualization tools.

Topic

Proteomics; Proteomics experiment

Details

  • Operation: Structure visualisation; Protein hydrogen exchange rate calculation
  • Software interface: Graphical user interface
  • Language: Java, JSP
  • Operating system: Microsoft Windows
  • License: Other
    • Cost: -
  • Version name: -
    • Maturity: Stable
  • Credit: US National Institutes of Health (NIH) National Institute of General Medical Sciences.
  • Contact: hdadmin _at_ scripps.edu | pgriffin _at_ scripps.edu
  • Collection: ms-utils

Publications

Pascal BD, Willis S, Lauer JL, Landgraf RR, West GM, Marciano D, Novick S, Goswami D, Chalmers MJ, Griffin PR "HDX workbench: software for the analysis of H/D exchange MS data." J. Am. Soc. Mass Spectrom. 2012; 23(9):1512-21 https://doi.org/10.1007/s13361-012-0419-6
PMID: 22692830
PMCID: PMC3808162


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