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LFQuant

LFQuant

LFQuant is a tool to analyze label-free LC-MS/MS quantitative proteomics data (SDS-PAGE and 2D LC), compatible with high-resolution mass spectrometers (Thermo RAW data) and SEQUEST and MASCOT database search engines using the target-decoy search strategy.

Topic

Proteomics; Proteomics experiment

Details

  • Operation: Analysis
  • Input: mzXML, Thermo, RAW, results from MASCOT, SEQUEST, and X!Tandem
  • Output: -
  • Software interface: Graphical user interface
  • Language: Microsoft Visual C++
  • Operating system: Microsoft Windows
  • License: GNU General Public License v3
  • Cost: Free
  • Version name: -
  • Credit: National Natural Science Foundation of China, Chinese National Key Program of Basic Research, State KeyLaboratory of Proteomics.
  • Contact: xhwei65 _at_ nudt.edu.cn;zhuyp _at_ hupo.org.cn
  • Collection: -

Publications

Zhang W, Zhang J, Xu C, Li N, Liu H, Ma J, Zhu Y, Xie H "LFQuant: a label-free fast quantitative analysis tool for high-resolution LC-MS/MS proteomics data." Proteomics 2012; 12(23-24):3475-84 https://doi.org/10.1002/pmic.201200017
PMID: 23081734


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