REPPER (REPeats and their PERiodicities) is a web-based tool to detect and analyze short identical repeats in protein sequences. The REPPER algorithm uses Fourier Transform and internal similarity analysis to find periodicities, computes values for properties (e.g., hydrophobicity), predict secondary structure prediction, and coiled-coil prediction.
Sequence composition, complexity and repeats; Proteins; Sequence analysis; Gene and protein families; Protein sites, features and motifs
Gruber M, Söding J, Lupas AN "REPPER--repeats and their periodicities in fibrous proteins." Nucleic Acids Res. 2005; 33(Web Server issue):W239-43 https://doi.org/10.1093/nar/gki405
PMID: 15980460
PMCID: PMC1160166
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