For better experience, turn on JavaScript!


Specialize

Specialize

Specialize is a tool to identify peptides with complex post-translational modifications from tandem mass spectra. It can identify, for example, UMOylation and Ubiquitylation.

Topic

Proteins; Proteomics; Proteomics experiment; Protein modifications; Protein structure analysis

Details

  • Operation: post-translational modification identification
  • Input: FASTA
  • Output: TSV
  • Software interface: Command-line user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: National Institutes of Health (NIH), United States.
  • Contact: jiw006 _at_ ucsd.edu
  • Collection: -

Publications

Wang J, Anania VG, Knott J, Rush J, Lill JR, Bourne PE, Bandeira N "A turn-key approach for large-scale identification of complex posttranslational modifications." J. Proteome Res. 2014; 13(3):1190-9 https://doi.org/10.1021/pr400368u
PMID: 24437954
PMCID: PMC3993922


Download and documentation








If you find errors, please report here.