AltAnalyze is a tool for the analysis of differential gene expression and alternative splicing in RNA-seq and Affymetrix (exon, gene, junction) data. The AltAnalyze includes multiple visualization functions, for example, network, pathway, splicing graph, and varying levels of abstraction: isoform, exon, protein, domain, molecular interactions.
Gene transcripts; RNA splicing; Molecular interactions, pathways and networks; Functional, regulatory and non-coding RNA; Gene expression
Emig D, Salomonis N, Baumbach J, Lengauer T, Conklin BR, Albrecht M "AltAnalyze and DomainGraph: analyzing and visualizing exon expression data." Nucleic Acids Res. 2010 Jul;38(Web Server issue):W755-62. 10.1093/nar/gkq405. Epub 2010 May 31. https://doi.org/10.1093/nar/gkq405
PMID: 20513647
PMCID: PMC2896198
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads