Bowtie is a tool for aligning short DNA sequence reads to a reference genome. The Bowtie algorithm uses the Burrows-Wheeler transform (BWT) technique and permits the use of multiple CPUs.
Mapping; Bioinformatics; Genomics; Sequencing
Langmead B, Trapnell C, Pop M, Salzberg SL "Ultrafast and memory-efficient alignment of short DNA sequences to the human genome." Genome Biol. 2009;10(3):R25. https://doi.org/10.1186/gb-2009-10-3-r25
PMID: 19261174
PMCID: PMC2690996
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