ClusterMine is an R tool for clustering single-cell RNA-seq data. The ClusterMine algorithm uses a gene set that contains functionally related genes for data partitioning into sub-categories. It analyses the sub-categories and combines these into a final clustering. ClusterMine requires a list of gene sets and a gene expression data matrix as inputs.
Sequencing; RNA-seq
Hong-Dong Li, Yunpei Xu, Xiaoshu Zhu, Quan Liu, Gilbert S. Omenn, Jianxin Wang "ClusterMine: a Knowledge-integrated Clustering Approach based on Expression Profiles of Gene Sets" biorxiv.org https://doi.org/10.1101/255711
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