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Heatmapper

Heatmapper

Heatmapper is a web-based tool to visualize data as heatmaps. It can generate heatmaps for a wide variety of data, for example, generate, cluster and visualize: (1) expression-based heat maps from transcriptomic, proteomic and metabolomic experiments; (2) pairwise distance maps; (3) correlation maps; (4) image overlay heat maps; (5) latitude and longitude heat maps and (6) geopolitical (choropleth) heat maps.

Topic

Transcriptomics; Proteomics; Metabolomics; Data visualisation

Details

  • Operation: Visualisation; Heat map generation
  • Software interface: Web user user interface
  • Language: -
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Maturity: Mature
  • Credit: Canadian Institutes of Health Research (CIHR), Genome Alberta, a division of Genome Canada.
  • Contact: David S. Wishart david.wishart _at_ ualberta.ca
  • Collection: -

Publications

Babicki S, Arndt D, Marcu A, Liang Y, Grant JR, Maciejewski A, Wishart DS "Heatmapper: web-enabled heat mapping for all." Nucleic Acids Res. 2016; 44(W1):W147-53 https://doi.org/10.1093/nar/gkw419
PMID: 27190236
PMCID: PMC4987948


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