KOBAS (KEGG Orthology-Based Annotation System) is a tool for the annotation of sequences by KEGG Orthology terms. KOBAS also identifies enriched pathways and uses KEGG Pathway, PID, BioCyc, Reactome, Panther and human data from OMIM, KEGG Disease, FunDO, GAD, NHGRI, and GWAS databases.
Molecular interactions, pathways and networks; Pathology; Database management; Sequence analysis
Mao X, Cai T, Olyarchuk JG, Wei L "Automated genome annotation and pathway identification using the KEGG Orthology (KO) as a controlled vocabulary." Bioinformatics 2005; 21(19):3787-93 https://doi.org/10.1093/bioinformatics/bti430
PMID: 15817693
Xie C, Mao X, Huang J, Ding Y, Wu J, Dong S, Kong L, Gao G, Li CY, Wei L "KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases" Nucleic Acids Res. 2011 Jul;39(Web Server issue):W316-22. https://doi.org/10.1093/nar/gkr483
PMID: 21715386
PMCID: PMC3125809
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads