LSTrAP (Large-Scale Transcriptome Analysis Pipeline) is a pipeline tool combining all required tools for the computation of co-expression networks in RNA_seq data sets. The LSTrAP also supports parallel and cluster computing.
RNA-seq; Molecular interactions, pathways and networks; Gene expression
Proost S, Krawczyk A, Mutwil M "LSTrAP: efficiently combining RNA sequencing data into co-expression networks." BMC Bioinformatics 2017; 18(1):444 https://doi.org/10.1186/s12859-017-1861-z
PMID: 29017446
PMCID: PMC5634843
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