MapPER is a tool to align paired-end reads in RNA-seq data sets. The MapPER algorithm uses an expectation-maximization method to assign likelihood values.
RNA-Seq; Transcriptomics; Bioinformatics
Hu Y, Wang K, He X, Chiang DY, Prins JF, Liu J "A probabilistic framework for aligning paired-end RNA-seq data." Bioinformatics 2010; 26(16):1950-7 https://doi.org/10.1093/bioinformatics/btq336
PMID: 20576625
PMCID: PMC2916723
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