MetaCell is a tool to analyze single-cell RNA-seq (scRNA-seq) UMI matrices. The MetaCell metacell algorithm uses K-nn graph partitions.
RNA-Seq; Gene expression
Baran Y, Bercovich A, Sebe-Pedros A, Lubling Y, Giladi A, Chomsky E, Meir Z, Hoichman M, Lifshitz A, Tanay A "MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions." Genome Biol 20(1): 206. https://doi.org/10.1186/s13059-019-1812-2
PMID: 31604482
PMCID: MC6790056
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