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PANEV

PANEV

PANEV (PAthway NEtwork Visualizer) is a tool to visualize gene/pathway-based networks using KEGG.

Topic

Molecular interactions, pathways and networks; Gene expression; RNA-Seq; Microarray experiment; Model organisms

Details

  • Operation: Pathway or network analysis; Visualisation; Gene expression analysis
  • Software interface: Command-line user interface; Library
  • Language: R
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Artistic-2.0
  • Cost: Free
  • Version name: 1.0
  • Credit: São Paulo Research Foundation (FAPESP).
  • Contact: Valentino Palombo valentino.palombo _at_ gmail.com | dandrea _at_ unimol.it
  • Collection: -

Publications

Palombo V, Milanesi M, Sferra G, Capomaccio S, Sgorlon S, D'Andrea M "PANEV: an R package for a pathway-based network visualization." BMC Bioinformatics 21(1): 46. https://doi.org/10.1186/s12859-020-3371-7
PMID: 32028885
PMCID: PMC7006390


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