RAP is a web-based tool for RNA-seq data analysis. The RAP workflow includes FastQC, NGS QC Toolkit, Tophat, Cufflinks, HTSeq, SpliceTrap, Cuffdiff2, DESeq, and ChimeraScan tools.
Bioinformatics; Sequencing; Transcriptomics; RNA-Seq
D'Antonio M, D'Onorio De Meo P, Pallocca M, Picardi E, D'Erchia AM, Calogero RA, Castrignano T, Pesole G "RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application." BMC Genomics. 2015;16:S3. https://doi.org/10.1186/1471-2164-16-S6-S3
PMID: 26046471
PMCID: PMC4461013
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