SNN-Cliq is a tool to cluster cells types based on the expression in single-cell RNA-seq (scRNA-seq) data, The SNN-Cliq algorithm uses the nearest neighbor method to detect similarities between data points.
RNA-seq; Transcriptomics; Gene expression; Statistics and probability
Xu C, Su Z "Identification of cell types from single-cell transcriptomes using a novel clustering method." Bioinformatics 2015; 31(12):1974-80 https://doi.org/10.1093/bioinformatics/btv088
PMID: 25805722
PMCID: PMC6280782
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