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SplicingViewer

SplicingViewer

SplicingViewer is a tool visualizing, detection, and annotation of splicing patterns.

Topic

RNA-Seq; Genomics

Details

  • Operation: Mapping
  • Input: SAM, BAM
  • Output: -
  • Software interface: Graphical user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: 1.1.0
  • Credit: -
  • Contact: Jinyu Wu iamwujy _at_ yahoo.com.cn | Qi Liu liuqi_1984 _at_ yahoo.com.cn
  • Collection: -

Publications

Tilgner H, Nikolaou C, Althammer S, Sammeth M, Beato M, Valcárcel J, Guigó R "Nucleosome positioning as a determinant of exon recognition." Nat. Struct. Mol. Biol. 2009; 16(9):996-1001 https://doi.org/10.1016/j.ygeno.2011.12.003
PMID: 19684599


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