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miARma-Seq
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miARma-Seq

miARma-Seq contains a suite of tools for differential expression analysis of miRNA, mRNA, and circRNA. It can also predict functions and targets and works in any organism.



miARma-Seq

miARma-Seq contains a suite of tools for differential expression analysis of miRNA, mRNA, and circRNA. It can also predict functions and targets and works in any organism.

Topic

Transcription factors and regulatory sites; RNA-seq; Mapping

Details

  • Operation: Nucleic acid sequence analysis
  • Software interface: Command-line user interface; Suite
  • Language: Perl
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: CC-BY-2.0
    • Cost: Free
  • Version name: 1.7.2
    • Maturity: Stable
  • Credit: The European Union grant
  • Contact: http://miarmaseq.idoproteins.com/help | Eduardo Andrés-León eduardo.andres _at_ csic.es | arojas-ibis _at_ us.es Ana M. Rojas
  • Collection: -

Publications

Andres-Leon E, Nunez-Torres R, Rojas AM "miARma-Seq: a comprehensive tool for miRNA, mRNA and circRNA analysis." Sci Rep. 2016 May 11;6:25749. https://doi.org/10.1038/srep25749
PMID: 27167008
PMCID: PMC4863143


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