RUbioSeq+ is an updated and extended version of RUbioSeq. It is an integrated software suite for primary and secondary analysis of single nucleotide (SNP), copy number variants (CNVs), and bisulfite-seq analyses. The extended version includes a pipeline for ChIP-seq experiments,
DNA-seq experiments, improvements in the parallelization, and
multithreading.
RUbioSeq+ is an updated and extended version of RUbioSeq. It is an integrated software suite for primary and secondary analysis of single nucleotide (SNP), copy number variants (CNVs), and bisulfite-seq analyses. The extended version includes a pipeline for ChIP-seq experiments,
DNA-seq experiments, improvements in the parallelization, and
multithreading.
Credit:
M.R-C is funded by the BLUEPRINT Consortium (FP7/ 2007–2013) under grant agreement number 282510. J.M.F, from INBUnit at CNIO, is funded by grant PRB2 (IPT13/0001 - ISCIII-SGEFI / FEDER). H.L-F is funded by a postdoctoral fellowshipfrom the Xunta de Galicia. F.F-R and D.G-P are funded by theEuropean Union Seventh Framework Programme FP7/REGPOT2012 2013.1 under grant agreement no. 316265 (BIOCAPS) andthe “Platform of integration of intelligent techniques for analy-sis of biomedical information” project (TIN2013-47153-C3-3-R) financed by the Spanish Ministry of Economy andCompetitiveness. C.FT is funded by the “Spanish National YouthGuarantee Implementation Plan” (2013/2016) financed by theSpanish Ministry of Economy and Competitiveness.
Contact:
H. López-Fernández hlfernandez _at_ uvigo.es
Collection: -
Publications
Rubio-Camarillo M, López-Fernández H, Gómez-López G, Carro Á, Fernández JM, Torre CF, Fdez-Riverola F, Glez-Peña D "RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data." https://doi.org/10.1016/j.cmpb.2016.10.008
PMID: 27886717