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RUbioSeq+ is an updated and extended version of RUbioSeq. It is an integrated software suite for primary and secondary analysis of single nucleotide (SNP), copy number variants (CNVs), and bisulfite-seq analyses. The extended version includes a pipeline for ChIP-seq experiments, DNA-seq experiments, improvements in the parallelization, and multithreading.


Exome sequencing; Sequencing; Epigenetics


  • Operation: Variant calling
  • Software interface: Work-flow; command-line user interface; garphical user interface
  • Language: Perl
  • Operating system: Linux
  • License: CC BY-NC-ND 3.0
  • Cost: Free
  • Version name: 3.8.1
  • Maturity: Mature
  • Credit: M.R-C is funded by the BLUEPRINT Consortium (FP7/ 2007–2013) under grant agreement number 282510. J.M.F, from INBUnit at CNIO, is funded by grant PRB2 (IPT13/0001 - ISCIII-SGEFI / FEDER). H.L-F is funded by a postdoctoral fellowshipfrom the Xunta de Galicia. F.F-R and D.G-P are funded by theEuropean Union Seventh Framework Programme FP7/REGPOT2012 2013.1 under grant agreement no. 316265 (BIOCAPS) andthe “Platform of integration of intelligent techniques for analy-sis of biomedical information” project (TIN2013-47153-C3-3-R) financed by the Spanish Ministry of Economy andCompetitiveness. C.FT is funded by the “Spanish National YouthGuarantee Implementation Plan” (2013/2016) financed by theSpanish Ministry of Economy and Competitiveness.
  • Contact: H. López-Fernández hlfernandez _at_
  • Collection: -


Rubio-Camarillo M, López-Fernández H, Gómez-López G, Carro Á, Fernández JM, Torre CF, Fdez-Riverola F, Glez-Peña D "RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data."
PMID: 27886717

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