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GIGI-Quick

GIGI-Quick

A tool for genotype imputation that can handle large pedigrees. The GIGI-Quick algorithm runs GIGI (see 'links') in parallel to reduce the overall run time.

Topic

Population genetics

Details

Publications

Kunji K, Ullah E, Nato AQ Jr, Wijsman EM, Saad M "GIGI-Quick: a fast approach to impute missing genotypes in genome-wide association family data." Bioinformatics. 2018 May 1;34(9):1591-1593. https://doi.org/10.1093/bioinformatics/btx782
PMID: 29267877
PMCID: PMC5925782

Cheung CY, Thompson EA, Wijsman EM "GIGI: an approach to effective imputation of dense genotypes on large pedigrees." Am J Hum Genet. 2013 Apr 4;92(4):504-16. https://doi.org/10.1016/j.ajhg.2013.02.011
PMID: 23561844
PMCID: PMC3617386

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