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DIALIGN

DIALIGN

DIALIGN is a multiple sequence alignment (MSA) tool. An improved version is called DIALIGN-TX which in turn is an improvement over DIALIGN-T, that combines greedy, progressive methods. See also 'LINKS'.

Topic

Phylogeny; Sequence analysis; Nucleic acid sites, features and motifs; Nucleic acid structure analysis; Sequence sites, features and motifs

Details

  • Operation: Multiple sequence alignment
  • Input: FASTA
  • Output: DIALIGN; FASTA
  • Software interface: Web user interface; command-line user interface
  • Language: C
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: GNU Lesser General Public License v2
  • Cost: Free
  • Version name: 1.0.2
  • Maturity: Mature
  • Credit: -
  • Contact: layal _at_ gobics.de | subraman _at_ informatik.uni-tuebingen.de
  • Collection: DIALIGN

Publications

Morgenstern B, Dress A, Werner T "Multiple DNA and protein sequence alignment based on segment-to-segment comparison." Proc Natl Acad Sci U S A. 1996 Oct 29;93(22):12098-103. https://doi.org/10.1073/pnas.93.22.12098
PMID: 8901539
PMCID: PMC37949


Morgenstern B, Frech K, Dress A, Werner T "DIALIGN: finding local similarities by multiple sequence alignment." Bioinformatics. 1998;14(3):290-4. https://doi.org/10.1093/bioinformatics/14.3.290
PMID: 9614273


Morgenstern B, Frech K, Dress A, Werner T "DIALIGN: finding local similarities by multiple sequence alignment." Bioinformatics. 1998;14(3):290-4. https://doi.org/10.1093/bioinformatics/14.3.290
PMID: 9614273


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