For better experience, turn on JavaScript!

OMSSA Parser
Home » Tools » Proteomics tools and software » OMSSA Parser

OMSSA Parser

OMSSA Parser is a tool to parse OMSSA (Open Mass Spectrometry Search Algorithm) omx files. The OMSSA Parser algorithm parses omx files and creates functional object models.



OMSSA Parser

OMSSA Parser is a tool to parse OMSSA (Open Mass Spectrometry Search Algorithm) omx files. The OMSSA Parser algorithm parses omx files and creates functional object models.

Topic

Proteomics

Details

  • Operation: Protein sequence analysis
  • Software interface: Command-line user interface; Graphical user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Apache License v2
    • Cost: Free
  • Version name: 1.9.0
  • Credit: The Research Council of Norway, the ‘‘ProDaC’’ grant of the European Union, the Ministerium fur Innovation, Wissenschaft, Forschung und Technologie des Landes Nordrhein-Westfalen, the Bundesministerium fur Bildung und Forschung.
  • Contact: lennart.martens _at_ ugent.be
  • Collection: -

Publications

Barsnes H, Huber S, Sickmann A, Eidhammer I, Martens L "OMSSA Parser: an open-source library to parse and extract data from OMSSA MS/MS search results." Proteomics. 2009 Jul;9(14):3772-4. https://doi.org/10.1002/pmic.200900037
PMID: 19639591


Download and documentation







If you find errors, please report here.

SECTIONS

Tutorials
In-house software
Blog
News
Find Jobs
History
Definition of Bioinformatics
ENCYCLOPEDIA
COVID-19
⚬ Timeline of outbreak
⚬ Blog
⚬ Scientific Facts
⚬ Daily statistics
⚬ News


TOOLS


1. SNP Tools
2. GWAS Tools
3. Genotype Imputation Tools
4. MSA tools
5. CNV tools
6. WGA tools
7. RNA-seq tools
8. Proteomics Tools
9. Nucleic Acid Structure Analysis Tools
10. Nucleic Acid Sequence Analysis Tools
11. Sequence Logo Tools
12. In-house Software Tools

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched




Ads