fastp is a FASTQ data pre-processing tool. The algorithm has functions for quality control, trimming of adapters, filtering by quality, and read pruning. It also supports multi-threading. The Authors claim fastp to be faster than other FASQ pre-processing tools.
Sequence analysis; Data quality management
Chen S, Zhou Y, Chen Y, Gu J "fastp: an ultra-fast all-in-one FASTQ preprocessor." Bioinformatics. 2018 Sep 1;34(17):i884-i890. https://doi.org/10.1093/bioinformatics/bty560
PMID: 30423086
PMCID: PMC6129281
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads